using System;
using System.Collections.Generic;
using System.Linq;
using System.Text;
using System.Threading.Tasks;

namespace BaseCellSimulation.Enzyms.Nucleus
{
    public class HistoneDeacetylase : InternalEnzym
    {
        public HistoneDeacetylase()
        {
            Km = 0.02;
            Vmax = 0.25;
        }

        public override void ApplyChanges(CellRessources res, double dt)
        {
            double dD = Math.Min(rate * dt, Math.Min(res.Res.Nucleus.ChromatinAccessibility / 0.1, res.Res.Energy.NAD));
            res.Res.Energy.NAD -= dD;
            res.Res.Energy.NADH += dD * 0.5;
            res.Res.Nucleus.ChromatinAccessibility = Math.Max(0.0, res.Res.Nucleus.ChromatinAccessibility - dD * 0.1);
        }

        public override void ComputeRate(Resources res)
        {
            Michaelis_Menten(res.Energy.NAD);
        }
    }
}